Structural Studies of Encephalomyocarditis Virus RNA both in situ and in Free Solution

References

1. Bachrach H. L. 1964; Foot-and-mouth disease virus: structure and mechanism of degradation as deduced from absorbance temperature measurements. Journal of Molecular Biology 8:348–358
   [Google Scholar]
2. Bachrach H. L. 1965; Foot-and-mouth disease virus structural changes during reaction with cations and formaldehyde as deduced from absorbance measurements. Virology 25:540–552
   [Google Scholar]
3. Beaven G. H., Holiday E. R. 1952; Ultraviolet absorption spectra of proteins and amino acids. Advances in Protein Chemistry 7:319–386
   [Google Scholar]
4. Black D. R., Connell C. J., Merigan T. C. 1973; Structure and infectivity of picomaviral RNA encapsidated by cowpea chlorotic mottle virus protein. Journal of Virology 12:1209–1215
   [Google Scholar]
5. Boedtker H. 1967; The reaction of ribonucleic acid with formaldehyde. I. Optical absorbance studies. Biochemistry 6:2718–2727
   [Google Scholar]
6. Bonhoeffer F., Schachman H. K. 1960; Studies on the organization of nucleic acids within nucleoproteins. Biochemical and Biophysical Research Communications 5:366–371
   [Google Scholar]
7. Burness A. T. H. 1969; Purification of encephalomyocarditis virus. Journal of General Virology 5:291–303
   [Google Scholar]
8. Burness A. T. H. 1970; Ribonucleic acid content of encephalomyocarditis virus. Journal of General Virology 6:373–380
   [Google Scholar]
9. Cotter R. I., Gratzer W. B. 1969; An infrared study of the conformation of RNA and protein in the ribosome. European Journal of Biochemistry 8:352–356
   [Google Scholar]
10. Crick F. H. C., Watson J. D. 1956; Structure of small viruses. Nature, London 177:473–475
    [Google Scholar]
11. Crick F. H. C., Watson J. D. 1957; Virus structure, general principles. In Ciba Foundation: Symposium on the Nature of Viruses pp 5–13
    [Google Scholar]
12. Dunker A. K., Rueckert R. R. 1971; Fragments generated by pH dissociation of ME virus and their relation to the structure of the virion. Journal of Molecular Biology 58:217–235
    [Google Scholar]
13. Fasman G. D., Lindblow C., Grossman L. 1964; The helical conformations of polycytidylic acid: studies on the forces involved. Biochemistry 3:1015–1021
    [Google Scholar]
14. Fasman G. D., Lindblow C., Seaman E. 1965; Optical rotatory dispersion studies on the conformational stabilisation forces of yeast soluble ribonucleic acid. Journal of Molecular Biology 12:630–640
    [Google Scholar]
15. Finch J. T., Klug A. 1959; Structure of poliomyelitis virus. Nature, London 183:1709–1714
    [Google Scholar]
16. Finch J. T., Klug A. 1966; Arrangement of protein subunits and the distribution of nucleic acid in turnip yellow mosaic virus. II. Electron microscopic studies. Journal of Molecular Biology 15:344–364
    [Google Scholar]
17. Frisby D. P. 1974 Ph.D. Thesis University of London; London, England:
18. Frisby D. P., Newton C., Carey N. H., Fellner P., Newman J. F. E., Harris T. J. R., Brown F. 1976a; Oligonucleotide mapping of picomavirus RNAs by two-dimensional electrophoresis. Virology 71:379–388
    [Google Scholar]
19. Frisby D. P., Smith J. C., Jeffers V., Porter A. G. 1976b; Size and location of poly(A) in encephalomyocarditis virus RNA. Nucleic Acids Research 3:2789–2810
    [Google Scholar]
20. Goldstein R. N., Stefanovic S., Kallenbach N. R. 1972; On the conformation of transfer RNA in solution: dependence of denaturation temperature and structural parameters of mixed and formyl-methionyl Escherichia coli transfer RNA on sodium ion concentration. Journal of Molecular Biology 69:217–236
    [Google Scholar]
21. Gould H. J., Simpkins H. 1969; Studies on the secondary structure of ribosomal ribonucleic acid components of rabbit reticulocytes. Biopolymers 7:223–239
    [Google Scholar]
22. Gratzer W. B., Cowburn D. A. 1969; Optical activity of biopolymers. Nature, London 222:426–431
    [Google Scholar]
23. Gratzer W. B., Richards E. G. 1971; Evaluation of RNA conformation from circular dichroism and optical rotatory dispersion data. Biopolymers 10:2607–2614
    [Google Scholar]
24. Hall L. 1971 Ph.D. Thesis University of Wisconsin; Madison, Wisconsin, U.S.A:
25. Henderson A. R. 1969; A constant volume device for preparing isokinetic sucrose gradients. Analytical Biochemistry 27:315–318
    [Google Scholar]
26. Holder J. W., Lingrel J. B. 1975; Determination of secondary structure in rabbit globin mRNA by thermal denaturation. Biochemistry 14:4209–4215
    [Google Scholar]
27. Kaper J. M., Geelen J. L. M. C. 1971; Studies on the stabilizing forces of simple RNA viruses. II. Stability, dissociation and reassembly of cucumber mosaic virus. Journal of Molecular Biology 56:277–294
    [Google Scholar]
28. Kaper J. M., Halperin J. E. 1965; Alkaline degradation of turnip yellow mosaic virus. II. In situ breakage of the ribonucleic acid. Biochemistry 4:2434–2441
    [Google Scholar]
29. Klug A., Longley W., Leberman R. 1966; Arrangement of protein subunits and the distribution of nucleic acid in turnip yellow mosaic virus. I. X-ray diffraction studies. Journal of Molecular Biology 15:315–343
    [Google Scholar]
30. Kotin L. 1963; On the effect of ionic strength on the melting temperature of DNA. Journal of Molecular Biology 7:309–311
    [Google Scholar]
31. Mcgregor S., Hall L., Rueckert R. R. 1975; Evidence for the existence of protomers in the assembly of encephalomyocarditis virus. Journal of Virology 15:1107–1120
    [Google Scholar]
32. Mak T. W., O’callaghan D. J., Kay C. M., Colter J. S. 1971; Studies of the protein subunit of pH-inactivated Mengovirus variants. II. Physicochemical properties. Virology 43:579–587
    [Google Scholar]
33. Mak T. W., Colter J. S., Scraba D. G. 1974; Structure of the Mengo-virion. II. Physicochemical and electron microscopic analysis of degraded virus. Virology 57:543–553
    [Google Scholar]
34. Marushige K., Bonner J. 1966; Template properties of liver chromatin. Journal of Molecular Biology 15:160–174
    [Google Scholar]
35. Min Jou W., Haegeman G., Ysebaert M., Fiers W. 1972; Nucleotide sequence of the gene coding for the bacteriophage MS2 coat protein. Nature, London 237:82–88
    [Google Scholar]
36. Noll H. 1967; Characterisation of macromolecules by constant velocity sedimentation. Nature, London 215:360–363
    [Google Scholar]
37. Porter A. G., Carey N. H., Fellner P. 1974; Presence of a large poly(rC) tract within the RNA of encephalomyocarditis virus. Nature, London 248:675–678
    [Google Scholar]
38. Richards E. G. 1968; On the analysis of melting curves of stacked polynucleotides. European Journal of Biochemistry 6:88–92
    [Google Scholar]
39. Rueckert R. R. 1971 In Comparative Virology Chapter 8 p 255–306 Edited by Maramorosch K., Kurstak E. New York: Academic Press;
    [Google Scholar]
40. Schildkraut C., Lifson S. 1965; Dependence of the melting temperature of DNA on salt concentration. Biopolymers 3:195–208
    [Google Scholar]
41. Scraba D. G., Hostvedt P., Colter J. S. 1970; Physical and chemical studies of mengovirus variants. III. Absorbance-temperature profiles, sedimentation in dextran sulphate gradients and total infectious particle ratios. Canadian Journal of Biochemistry 48:412–417
    [Google Scholar]
42. Staynov D. Z., Pinder J. C., Gratzer W. B. 1972; Molecular weight determination of nucleic acids by gel electrophoresis in non-aqueous solution. Nature New Biology 235:108–110
    [Google Scholar]
43. Tsuboi M., Matsuo K., Ts’o P. O. P. 1966; Interaction of poly-L-lysine and nucleic acids. Journal of Molecular Biology 15:256–267
    [Google Scholar]
44. Van N. T., Holder J. W., Woo S. L. C., Means A. R., O’malley B. W. 1976; Secondary structure of ovalbumin messenger RNA. Biochemistry 15:2054–2062
    [Google Scholar]
45. Vanden Berghe D., Boeye A. 1973; In situ fragmentation of RNA in poliovirus. Archiv fur die Gesamte Virusforschung 40:215–221
    [Google Scholar]
46. Yang J. T., Samejima T. 1969; Optical rotatory dispersion and circular dichroism of nucleic acids. Progress in Nucleic Acids Research and Molecular Biology 9:223–300
    [Google Scholar]