1887

Abstract

The genus of the family includes a genetically diverse group of dsRNA arthropod-borne viruses that infect a wide variety of animal species. Here, we report the complete genome and phylogenetic analysis of a novel orbivirus (IAn-66411 or Sathuvachari virus, SVIV) isolated in 1963 from starlings () collected in Vellore, Tamil Nadu, India. Comparative genetic analysis of the SVIV polymerase (VP1 protein), core protein (VP3) and outer core protein (VP7) confirmed that SVIV is most closely related to the mosquito-borne orbiviruses, but that it is equally divergent from all known species. Therefore, SVIV should be tentatively considered as the prototype of a novel mosquito-associated species. These findings will aid in the development of molecular reagents that can identify genetically similar orbiviruses and help elucidate their geographical distribution, epidemiology, species tropism and possible disease association.

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2013-05-01
2024-04-23
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References

  1. Arrigo N. C., Briese T., Calisher C. H., Drebot M. A., Hjelle B., LeDuc J. W., Powers A. M., Repik P. M., Roehrig J. T.other authors 2012; Recommendations for publication of viral genetic data and sample access for novel viruses and strains. Am J Trop Med Hyg 86:189–191 [View Article][PubMed]
    [Google Scholar]
  2. Attoui H., Mohd Jaafar F., Belhouchet M., Aldrovandi N., Tao S., Chen B., Liang G., Tesh R. B., de Micco P., de Lamballerie X. 2005; Yunnan orbivirus, a new orbivirus species isolated from Culex tritaeniorhynchus mosquitoes in China. J Gen Virol 86:3409–3417 [View Article][PubMed]
    [Google Scholar]
  3. Attoui H., Mendez-Lopez M. R., Rao S., Hurtado-Alendes A., Lizaraso-Caparo F., Jaafar F. M., Samuel A. R., Belhouchet M., Pritchard L. I.other authors 2009; Peruvian horse sickness virus and Yunnan orbivirus, isolated from vertebrates and mosquitoes in Peru and Australia. Virology 394:298–310 [View Article][PubMed]
    [Google Scholar]
  4. Attoui H., Mertense P. P. C., Becnel J., Belaganahalli S., Bergoin M., Brussaard C. P., Chappell J. D., Ciarlet M., del Vas M.other authors 2011; Virus taxonomy. In Ninth Report of the International Committee on Taxonomy of Viruses, 1 edn. p. 1338 Edited by King A. M. Q., Adams M. J., Carstens E. B., Lefkowitz E. J. Elsevier;
    [Google Scholar]
  5. Beaty B., Calisher C. H., Shope R. E. 1989 Diagnostic Procedures for Viral, Rickettsial and Chlamydial Infections, 5th edn. Edited by Schmidt N. J., Emmons R. W. Washington: American Public Health Association;
    [Google Scholar]
  6. Belaganahalli M. N., Maan S., Maan N. S., Tesh R., Attoui H., Mertens P. P. 2011; Umatilla virus genome sequencing and phylogenetic analysis: identification of stretch lagoon orbivirus as a new member of the Umatilla virus species. PLoS ONE 6:e23605 [View Article][PubMed]
    [Google Scholar]
  7. Belaganahalli M. N., Maan S., Maan N. S., Nomikou K., Pritchard I., Lunt R., Kirkland P. D., Attoui H., Brownlie J., Mertens P. P. 2012; Full genome sequencing and genetic characterization of Eubenangee viruses identify Pata virus as a distinct species within the genus Orbivirus. PLoS ONE 7:e31911 [View Article][PubMed]
    [Google Scholar]
  8. Belhouchet M., Mohd Jaafar F., Tesh R., Grimes J., Maan S., Mertens P. P., Attoui H. 2010; Complete sequence of Great Island virus and comparison with the T2 and outer-capsid proteins of Kemerovo, Lipovnik and Tribec viruses (genus Orbivirus, family Reoviridae). J Gen Virol 91:2985–2993 [View Article][PubMed]
    [Google Scholar]
  9. Burbelo P. D., Ching K. H., Esper F., Iadarola M. J., Delwart E., Lipkin W. I., Kapoor A. 2011; Serological studies confirm the novel astrovirus HMOAstV-C as a highly prevalent human infectious agent. PLoS ONE 6:e22576 [View Article][PubMed]
    [Google Scholar]
  10. Burbelo P. D., Dubovi E. J., Simmonds P., Medina J. L., Henriquez J. A., Mishra N., Wagner J., Tokarz R., Cullen J. M.other authors 2012; Serology-enabled discovery of genetically diverse hepaciviruses in a new host. J Virol 86:6171–6178 [View Article][PubMed]
    [Google Scholar]
  11. Carey D. E., Reuben R., Myers R. M. 1968a; Japanese encephalitis studies in Vellore, South India. I. Virus isolation from mosquitoes. Indian J Med Res 56:1309–1318[PubMed]
    [Google Scholar]
  12. Carey D. E., Rodrigues F. M., Myers R. M., Webb J. K. 1968b; Arthropod-borne viral infections in children in Vellore, South India, with particular reference to dengue and West Nile viruses. Indian Pediatr 5:285–296[PubMed]
    [Google Scholar]
  13. Kapoor A., Victoria J., Simmonds P., Slikas E., Chieochansin T., Naeem A., Shaukat S., Sharif S., Alam M. M.other authors 2008a; A highly prevalent and genetically diversified Picornaviridae genus in South Asian children. Proc Natl Acad Sci U S A 105:20482–20487 [View Article][PubMed]
    [Google Scholar]
  14. Kapoor A., Victoria J., Simmonds P., Wang C., Shafer R. W., Nims R., Nielsen O., Delwart E. 2008b; A highly divergent picornavirus in a marine mammal. J Virol 82:311–320 [View Article][PubMed]
    [Google Scholar]
  15. Kapoor A., Simmonds P., Gerold G., Qaisar N., Jain K., Henriquez J. A., Firth C., Hirschberg D. L., Rice C. M.other authors 2011; Characterization of a canine homolog of hepatitis C virus. Proc Natl Acad Sci U S A 108:11608–11613 [View Article][PubMed]
    [Google Scholar]
  16. Knudson D. L., Tesh R. B., Main A. J., St George T. D., Digoutte J. P. 1984; Characterization of the Palyam serogroup viruses (Reoviridae: Orbivirus). Intervirology 22:41–49 [View Article][PubMed]
    [Google Scholar]
  17. Palacios G., Cowled C., Bussetti A. V., Savji N., Weir R., Wick I., Travassos da Rosa A., Calisher C. H., Tesh R. B.other authors 2011; Rapid molecular strategy for orbivirus detection and characterization. J Clin Microbiol 49:2314–2317 [View Article][PubMed]
    [Google Scholar]
  18. Ratinier M., Caporale M., Golder M., Franzoni G., Allan K., Nunes S. F., Armezzani A., Bayoumy A., Rixon F.other authors 2011; Identification and characterization of a novel non-structural protein of bluetongue virus. PLoS Pathog 7:e1002477 [View Article][PubMed]
    [Google Scholar]
  19. Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. 2011; mega5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739 [View Article][PubMed]
    [Google Scholar]
  20. Tesh R. B., Peleg J., Samina I., Margalit J., Bodkin D. K., Shope R. E., Knudson D. 1986; Biological and antigenic characterization of Netivot virus, an unusual new Orbivirus recovered from mosquitoes in Israel. Am J Trop Med Hyg 35:418–428[PubMed]
    [Google Scholar]
  21. Victoria J. G., Kapoor A., Dupuis K., Schnurr D. P., Delwart E. L. 2008; Rapid identification of known and new RNA viruses from animal tissues. PLoS Pathog 4:e1000163 [View Article][PubMed]
    [Google Scholar]
  22. Victoria J. G., Kapoor A., Li L., Blinkova O., Slikas B., Wang C., Naeem A., Zaidi S., Delwart E. 2009; Metagenomic analyses of viruses in stool samples from children with acute flaccid paralysis. J Virol 83:4642–4651 [View Article][PubMed]
    [Google Scholar]
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