1887

Abstract

Beak and feather disease virus (BFDV) causes the highly contagious, in some cases fatal, psittacine beak and feather disease in parrots. The European continent has no native parrots, yet in the past has been one of the world’s biggest importers of wild-caught exotic parrot species. Following the banning of this practice in 2007, the demand for exotic pet parrots has largely been met by established European breeding facilities, which can also supply buyers outside Europe. However, the years of unregulated importation have provided numerous opportunities for BFDV to enter Europe, meaning the likelihood of birds within captive breeding facilities being BFDV positive is high. This study examined the BFDV status of such facilities in Poland, a country previously shown to have BFDV among captive birds. A total of 209 birds from over 50 captive breeding facilities across Poland were tested, and 43 birds from 18 different facilities tested positive for BFDV. The full BFDV genomes from these 43 positive birds were determined, and phylogenetic analysis revealed that these samples harboured a relatively high degree of diversity and that they were highly recombinant. It is evident that there have been multiple introductions of BFDV into Poland over a long period of time, and the close association of different species of birds in the captive environment has probably facilitated the evolution of new BFDV strains through recombination.

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2013-05-01
2024-03-28
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References

  1. Anisimova M., Gascuel O. 2006; Approximate likelihood-ratio test for branches: a fast, accurate, and powerful alternative. Syst Biol 55:539–552 [View Article][PubMed]
    [Google Scholar]
  2. Ashby E. 1906; Parakeets moulting. Emu 6:193–194 [View Article]
    [Google Scholar]
  3. Bert E., Tomassone L., Peccati C., Navarrete M. G., Sola S. C. 2005; Detection of beak and feather disease virus (BFDV) and avian polyomavirus (APV) DNA in psittacine birds in Italy. J Vet Med B Infect Dis Vet Public Health 52:64–68 [View Article][PubMed]
    [Google Scholar]
  4. Boni M. F., Posada D., Feldman M. W. 2007; An exact nonparametric method for inferring mosaic structure in sequence triplets. Genetics 176:1035–1047 [View Article][PubMed]
    [Google Scholar]
  5. Cai L., Ni J., Xia Y., Zi Z., Ning K., Qiu P., Li X., Wang B., Liu Q. other authors 2012; Identification of an emerging recombinant cluster in porcine circovirus type 2. Virus Res 165:95–102 [View Article][PubMed]
    [Google Scholar]
  6. Cheung A. K. 2009; Homologous recombination within the capsid gene of porcine circovirus type 2 subgroup viruses via natural co-infection. Arch Virol 154:531–534 [View Article][PubMed]
    [Google Scholar]
  7. Delport W., Poon A. F., Frost S. D., Kosakovsky Pond S. L. 2010; Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology. Bioinformatics 26:2455–2457 [View Article][PubMed]
    [Google Scholar]
  8. Doneley R. J. 2003; Acute beak and feather disease in juvenile African Grey parrots – an uncommon presentation of a common disease. Aust Vet J 81:206–207 [View Article][PubMed]
    [Google Scholar]
  9. Edgar R. C. 2004; muscle: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32:1792–1797 [View Article][PubMed]
    [Google Scholar]
  10. Forshaw J. M. 2010 Parrots of the World Princeton, NJ: Princeton University Press;
    [Google Scholar]
  11. Gibbs M. J., Armstrong J. S., Gibbs A. J. 2000; Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequences. Bioinformatics 16:573–582 [View Article][PubMed]
    [Google Scholar]
  12. Guindon S., Gascuel O. 2003; A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52:696–704 [View Article][PubMed]
    [Google Scholar]
  13. Guindon S., Dufayard J. F., Lefort V., Anisimova M., Hordijk W., Gascuel O. 2010; New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59:307–321 [View Article][PubMed]
    [Google Scholar]
  14. Heath L., Martin D. P., Warburton L., Perrin M., Horsfield W., Kingsley C., Rybicki E. P., Williamson A. L. 2004; Evidence of unique genotypes of beak and feather disease virus in southern Africa. J Virol 78:9277–9284 [View Article][PubMed]
    [Google Scholar]
  15. Henriques A. M., Fagulha T., Duarte M., Ramos F., Barros S., Luís T., Bernardino R., Fevereiro M. 2010; Phylogenetic analysis of six isolates of beak and feather disease virus from African grey parrots in Portugal. Avian Dis 54:1066–1071 [View Article][PubMed]
    [Google Scholar]
  16. Julian L., Lorenzo A., Chenuet J. P., Bonzon M., Marchal C., Vignon L., Collings D. A., Walters M., Jackson B., Varsani A. 2012; Evidence of multiple introductions of beak and feather disease virus into the Pacific islands of Nouvelle-Caledonie (New Caledonia). J Gen Virol 93:2466–2472 [View Article][PubMed]
    [Google Scholar]
  17. Kosakovsky Pond S. L., Frost S. D. 2005; Not so different after all: a comparison of methods for detecting amino acid sites under selection. Mol Biol Evol 22:1208–1222 [View Article][PubMed]
    [Google Scholar]
  18. Kosakovsky Pond S. L., Posada D., Gravenor M. B., Woelk C. H., Frost S. D. 2006; Automated phylogenetic detection of recombination using a genetic algorithm. Mol Biol Evol 23:1891–1901 [View Article][PubMed]
    [Google Scholar]
  19. Latimer K. S., Rakich P. M., Niagro F. D., Ritchie B. W., Steffens W. L., Campagnoli R. P., Pesti D. A., Lukert P. D. 1991; An updated review of psittacine beak and feather disease. Journal of the Association of Avian Veterinarians 5:211–220 [View Article]
    [Google Scholar]
  20. Lefeuvre P., Lett J. M., Varsani A., Martin D. P. 2009; Widely conserved recombination patterns among single-stranded DNA viruses. J Virol 83:2697–2707 [View Article][PubMed]
    [Google Scholar]
  21. Martin D., Rybicki E. 2000; rdp: detection of recombination amongst aligned sequences. Bioinformatics 16:562–563 [View Article][PubMed]
    [Google Scholar]
  22. Martin D. P., Posada D., Crandall K. A., Williamson C. 2005; A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints. AIDS Res Hum Retroviruses 21:98–102 [View Article][PubMed]
    [Google Scholar]
  23. Massaro M., Ortiz-Catedral L., Julian L., Galbraith J. A., Kurenbach B., Kearvell J., Kemp J., van Hal J., Elkington S. other authors 2012; Molecular characterisation of beak and feather disease virus (BFDV) in New Zealand and its implications for managing an infectious disease. Arch Virol 157:1651–1663 [View Article][PubMed]
    [Google Scholar]
  24. Muhire B., Martin D. P., Brown J. K., Navas-Castillo J., Moriones E., Zerbini F. M., Rivera-Bustamante R., Malathi V. G., Briddon R. W., Varsani A. 2013; A genome-wide pairwise-identity-based proposal for the classification of viruses in the genus Mastrevirus (family Geminiviridae). Arch Virol doi: 10.1007/s00705-012-1601-7 [View Article][PubMed]
    [Google Scholar]
  25. Niagro F. D., Forsthoefel A. N., Lawther R. P., Kamalanathan L., Ritchie B. W., Latimer K. S., Lukert P. D. 1998; Beak and feather disease virus and porcine circovirus genomes: intermediates between the geminiviruses and plant circoviruses. Arch Virol 143:1723–1744 [View Article][PubMed]
    [Google Scholar]
  26. Ortiz-Catedral L., Kurenbach B., Massaro M., McInnes K., Brunton D. H., Hauber M. E., Martin D. P., Varsani A. 2010; A new isolate of beak and feather disease virus from endemic wild red-fronted parakeets (Cyanoramphus novaezelandiae) in New Zealand. Arch Virol 155:613–620 [View Article][PubMed]
    [Google Scholar]
  27. Padidam M., Sawyer S., Fauquet C. M. 1999; Possible emergence of new geminiviruses by frequent recombination. Virology 265:218–225 [View Article][PubMed]
    [Google Scholar]
  28. Pass D. A., Perry R. A. 1984; The pathology of psittacine beak and feather disease. Aust Vet J 61:69–74 [View Article][PubMed]
    [Google Scholar]
  29. Piasecki T., Wieliczko A. 2010; Detection of beak and feather disease virus and avian polyomavirus DNA in psittacine birds in poland. Bull Vet Inst Pulawy 54:141–146
    [Google Scholar]
  30. Posada D., Crandall K. A. 2001; Evaluation of methods for detecting recombination from DNA sequences: computer simulations. Proc Natl Acad Sci U S A 98:13757–13762 [View Article][PubMed]
    [Google Scholar]
  31. Rahaus M., Wolff M. H. 2003; Psittacine beak and feather disease: a first survey of the distribution of beak and feather disease virus inside the population of captive psittacine birds in Germany. J Vet Med B Infect Dis Vet Public Health 50:368–371 [View Article][PubMed]
    [Google Scholar]
  32. Rahaus M., Desloges N., Probst S., Loebbert B., Lantermann W., Wolff M. H. 2008; Detection of beak and feather disease virus DNA in embryonated eggs of psittacine birds. Vet Med (Praha) 53:53–58
    [Google Scholar]
  33. Ritchie B. W., Niagro F. D., Lukert P. D., Steffens W. L. III, Latimer K. S. 1989; Characterization of a new virus from cockatoos with psittacine beak and feather disease. Virology 171:83–88 [View Article][PubMed]
    [Google Scholar]
  34. Ritchie B. W., Niagro F. D., Latimer K. S., Lukert P. D., Steffens W. L. III, Rakich P. M., Pritchard N. 1990; Ultrastructural, protein composition, and antigenic comparison of psittacine beak and feather disease virus purified from four genera of psittacine birds. J Wildl Dis 26:196–203[PubMed] [CrossRef]
    [Google Scholar]
  35. Ritchie B. W., Niagro F. D., Latimer K. S., Steffens W. L., Pesti D., Ancona J., Lukert P. D. 1991; Routes and prevalence of shedding of psittacine beak and feather disease virus. Am J Vet Res 52:1804–1809[PubMed]
    [Google Scholar]
  36. Ritchie P. A., Anderson I. L., Lambert D. M. 2003; Evidence for specificity of psittacine beak and feather disease viruses among avian hosts. Virology 306:109–115 [View Article][PubMed]
    [Google Scholar]
  37. Rosario K., Duffy S., Breitbart M. 2012; A field guide to eukaryotic circular single-stranded DNA viruses: insights gained from metagenomics. Arch Virol 157:1851–1871 [View Article][PubMed]
    [Google Scholar]
  38. Smith J. M. 1992; Analyzing the mosaic structure of genes. J Mol Evol 34:126–129 [View Article][PubMed]
    [Google Scholar]
  39. Strubbe D., Matthysen E. 2009; Establishment success of invasive ring‐necked and monk parakeets in Europe. J Biogeogr 36:2264–2278 [View Article]
    [Google Scholar]
  40. Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. 2011; mega5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739 [View Article][PubMed]
    [Google Scholar]
  41. Todd D. 2000; Circoviruses: immunosuppressive threats to avian species: a review. Avian Pathol 29:373–394 [View Article][PubMed]
    [Google Scholar]
  42. Tomasek O., Tukac V. 2007; Psittacine circovirus infection in parakeets of the genus Eunymphicus and treatment with β(1,3/1,6)-d-glucan. Avian Dis 51:989–991 [View Article][PubMed]
    [Google Scholar]
  43. Varsani A., de Villiers G. K., Regnard G. L., Bragg R. R., Kondiah K., Hitzeroth I. I., Rybicki E. P. 2010; A unique isolate of beak and feather disease virus isolated from budgerigars (Melopsittacus undulatus) in South Africa. Arch Virol 155:435–439 [View Article][PubMed]
    [Google Scholar]
  44. Varsani A., Regnard G. L., Bragg R., Hitzeroth I. I., Rybicki E. P. 2011; Global genetic diversity and geographical and host-species distribution of beak and feather disease virus isolates. J Gen Virol 92:752–767 [View Article][PubMed]
    [Google Scholar]
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