Production of a Beet chlorosis virus full-length cDNA clone by means of Gibson assembly and analysis of biological properties

References

1. Smith HG, Hallsworth PB. The effects of yellowing viruses on yield of sugar beet in field trials, 1985 and 1987. Ann Appl Biol 1990; 116:503–511 [View Article]
   [Google Scholar]
2. Hauser S, Stevens M, Beuve M, Lemaire O. Biological properties and molecular characterization of beet chlorosis virus (BChV). Arch Virol 2002; 147:745–762 [View Article][PubMed]
   [Google Scholar]
3. Stevens M, Hallsworth PB, Smith HG. The effects of Beet mild yellowing virus and Beet chlorosis virus on the yield of UK field-grown sugar beet in 1997,1999 and 2000. Ann Appl Biol 2004; 144:113–119 [View Article]
   [Google Scholar]
4. Stevens M, Freeman B, Liu HY, Herrbach E, Lemaire O. Beet poleroviruses: close friends or distant relatives?. Mol Plant Pathol 2005; 6:1–9 [View Article][PubMed]
   [Google Scholar]
5. Mayo MA, Ziegler-Graff V. Molecular biology of luteoviruses. Adv Virus Res 1996; 46:413–460[PubMed]
   [Google Scholar]
6. Gray S, Gildow FE. Luteovirus-aphid interactions. Annu Rev Phytopathol 2003; 41:539–566 [View Article][PubMed]
   [Google Scholar]
7. Draycott AP. Sugar Beet Oxford, UK: Blackwell Publishing Ltd; 2006
   [Google Scholar]
8. Stevens M, Smith HG, Hallsworth PB. Identification of a second distinct strain of beet mild yellowing luteovirus using monoclonal antibodies and transmission studies. Ann Appl Biol 1994; 125:515–520 [View Article]
   [Google Scholar]
9. Duffus JE, Liu HY. Unique beet western yellows virus isolates from California and Texas. J Sugar Beet Res 1991; 28:68
   [Google Scholar]
10. Hauser S, Stevens M, Mougel C, Smith HG, Fritsch C et al. Biological, serological, and molecular variability suggest three distinct polerovirus species infecting beet or rape. Phytopathology 2000; 90:460–466 [View Article][PubMed]
    [Google Scholar]
11. Smirnova E, Firth AE, Miller WA, Scheidecker D, Brault V et al. Discovery of a small non-AUG-Initiated ORF in poleroviruses and luteoviruses that is required for long-distance movement. PLoS Pathog 2015; 11:e1004868 [View Article][PubMed]
    [Google Scholar]
12. Mayo MA, Miller WA. The structure. and expression of luteovirus genomes. In Smith HG, Barker H. (editors) The Luteoviridae Wallingford, UK: CABI Publishing; 1999 pp. 23–42
    [Google Scholar]
13. van der Wilk F, Houterman P, Molthoff J, Hans F, Dekker B et al. Expression of the potato leafroll virus ORF0 induces viral-disease-like symptoms in transgenic potato plants. Mol Plant Microbe Interact 1997; 10:153–159 [View Article][PubMed]
    [Google Scholar]
14. Pfeffer S, Dunoyer P, Heim F, Richards KE, Jonard G et al. P0 of beet western yellows virus is a suppressor of posttranscriptional gene silencing. J Virol 2002; 76:6815–6824 [View Article][PubMed]
    [Google Scholar]
15. Pazhouhandeh M, Dieterle M, Marrocco K, Lechner E, Berry B et al. F-box-like domain in the polerovirus protein P0 is required for silencing suppressor function. Proc Natl Acad Sci USA 2006; 103:1994–1999 [View Article][PubMed]
    [Google Scholar]
16. Kozlowska-Makulska A, Guilley H, Szyndel MS, Beuve M, Lemaire O et al. P0 proteins of European beet-infecting poleroviruses display variable RNA silencing suppression activity. J Gen Virol 2010; 91:1082–1091 [View Article][PubMed]
    [Google Scholar]
17. Brault V, van den Heuvel JF, Verbeek M, Ziegler-Graff V, Reutenauer A et al. Aphid transmission of beet western yellows luteovirus requires the minor capsid read-through protein P74. EMBO J 1995; 14:650–659[PubMed]
    [Google Scholar]
18. Brault V, Périgon S, Reinbold C, Erdinger M, Scheidecker D et al. The polerovirus minor capsid protein determines vector specificity and intestinal tropism in the aphid. J Virol 2005; 79:9685–9693 [View Article][PubMed]
    [Google Scholar]
19. Peter KA, Gildow F, Palukaitis P, Gray SM. The C terminus of the polerovirus p5 readthrough domain limits virus infection to the phloem. J Virol 2009; 83:5419–5429 [View Article][PubMed]
    [Google Scholar]
20. Tacke E, Schmitz J, Prüfer D, Rohde W. Mutational analysis of the nucleic acid-binding 17 kDa phosphoprotein of potato leafroll luteovirus identifies an amphipathic alpha-helix as the domain for protein/protein interactions. Virology 1993; 197:274–282 [View Article][PubMed]
    [Google Scholar]
21. Ziegler-Graff V et al. The Coat Protein of Beet Western Yellows Luteovirus is Essential for Systemic Infection but the Viral Gene Products P29 and P19 are Dispensable for Systemic Infection and Aphid Transmission. Molecular Plant-Microbe Interactions 1996; 9:501–510 [View Article]
    [Google Scholar]
22. Leiser RM, Ziegler-Graff V, Reutenauer A, Herrbach E, Lemaire O et al. Agroinfection as an alternative to insects for infecting plants with beet western yellows luteovirus. Proc Natl Acad Sci USA 1992; 89:9136–9140 [View Article][PubMed]
    [Google Scholar]
23. Stephan D, Maiss E. Biological properties of Beet mild yellowing virus derived from a full-length cDNA clone. J Gen Virol 2006; 87:445–449 [View Article][PubMed]
    [Google Scholar]
24. Klein E, Brault V, Klein D, Weyens G, Lefèbvre M et al. Divergence of host range and biological properties between natural isolate and full-length infectious cDNA clone of the Beet mild yellowing virus 2ITB. Mol Plant Pathol 2014; 15:22–30 [View Article][PubMed]
    [Google Scholar]
25. Franco-Lara LF, McGeachy KD, Commandeur U, Martin RR, Mayo MA et al. Transformation of tobacco and potato with cDNA encoding the full-length genome of potato leafroll virus: evidence for a novel virus distribution and host effects on virus multiplication. J Gen Virol 1999; 80:2813–2822 [View Article][PubMed]
    [Google Scholar]
26. Prüfer D, Wipf-Scheibel C, Richards K, Guilley H, Lecoq H et al. Synthesis of a full-length infectious cDNA clone of cucurbit aphid-borne yellows virus and its use in gene exchange experiments with structural proteins from other luteoviruses. Virology 1995; 214:150–158 [View Article][PubMed]
    [Google Scholar]
27. Delfosse VC, Casse MF, Agrofoglio YC, Kresic IB, Hopp HE et al. Agroinoculation of a full-length cDNA clone of cotton leafroll dwarf virus (CLRDV) results in systemic infection in cotton and the model plant Nicotiana benthamiana. Virus Res 2013; 175:64–70 [View Article][PubMed]
    [Google Scholar]
28. Zhang XY, Dong SW, Xiang HY, Chen XR, Li DW et al. Development of three full-length infectious cDNA clones of distinct brassica yellows virus genotypes for agrobacterium-mediated inoculation. Virus Res 2015; 197:13–16 [View Article][PubMed]
    [Google Scholar]
29. Youssef F, Marais A, Faure C, Gentit P, Candresse T. Strategies to facilitate the development of uncloned or cloned infectious full-length viral cDNAs: Apple chlorotic leaf spot virus as a case study. Virol J 2011; 8:488 [View Article][PubMed]
    [Google Scholar]
30. Desbiez C, Chandeysson C, Lecoq H, Moury B. A simple, rapid and efficient way to obtain infectious clones of potyviruses. J Virol Methods 2012; 183:94–97 [View Article][PubMed]
    [Google Scholar]
31. Gibson DG, Young L, Chuang RY, Venter JC, Hutchison CA et al. Enzymatic assembly of DNA molecules up to several hundred kilobases. Nat Methods 2009; 6:343–345 [View Article][PubMed]
    [Google Scholar]
32. Bordat A, Houvenaghel MC, German-Retana S. Gibson assembly: an easy way to clone potyviral full-length infectious cDNA clones expressing an ectopic VPg. Virol J 2015; 12:89 [View Article][PubMed]
    [Google Scholar]
33. Blawid R, Nagata T. Construction of an infectious clone of a plant RNA virus in a binary vector using one-step Gibson Assembly. J Virol Methods 2015; 222:11–15 [View Article][PubMed]
    [Google Scholar]
34. Bijora T, Blawid R, Costa DKT, Aragão FJL, Souto ER et al. Construction of an agroinfectious clone of bean rugose mosaic virus using Gibson Assembly. Virus Genes 2017; 53:495–499 [View Article][PubMed]
    [Google Scholar]
35. Carvalho SL, Nagata T, Junqueira BR, Zanardo LG, Paiva AC et al. Construction of a full-length infectious cDNA clone of Cowpea mild mottle virus. Virus Genes 2017; 53:137–140 [View Article][PubMed]
    [Google Scholar]
36. Laufer M, Mohammad H, Maiss E, Richert-Pöggeler K, dall'ara M et al. Biological properties of Beet soil-borne mosaic virus and Beet necrotic yellow vein virus cDNA clones produced by isothermal in vitro recombination: Insights for reassortant appearance. Virology 2018; 518:25–33 [View Article][PubMed]
    [Google Scholar]
37. Frohman MA, Dush MK, Martin GR. Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer. Proc Natl Acad Sci USA 1988; 85:8998–9002 [View Article][PubMed]
    [Google Scholar]
38. Holsters M, Silva B, van Vliet F, Genetello C, de Block M et al. The functional organization of the nopaline A. tumefaciens plasmid pTiC58. Plasmid 1980; 3:212–230 [View Article][PubMed]
    [Google Scholar]
39. English J, Davenport G, Elmayan T, Vaucheret H, Baulcombe D. Requirement of sense transcription for homology-dependent virus resistance and trans-inactivation. Plant J 1997; 12:597–603 [View Article]
    [Google Scholar]
40. Katul L. Serologische und molekularbiologische Charakterisierung des bean leaf roll virus (BLRV) und des faba bean necrotic yellows virus (FBNYV). Ph.D. thesis University of Göttingen, Germany; 1992
    [Google Scholar]
41. Abraham AD, Menzel W, Lesemann DE, Varrelmann M, Vetten HJ. Chickpea chlorotic stunt virus: a new polerovirus infecting cool-season food legumes in Ethiopia. Phytopathology 2006; 96:437–446 [View Article][PubMed]
    [Google Scholar]
42. Boissinot S, Pichon E, Sorin C, Piccini C, Scheidecker D et al. Systemic propagation of a fluorescent infectious clone of a polerovirus following inoculation by agrobacteria and aphids. Viruses 2017; 9:166 [View Article][PubMed]
    [Google Scholar]