Diversity of the population of Tick-borne encephalitis virus infecting Ixodes ricinus ticks in an endemic area of central Switzerland (Canton Bern)

References

1. Blaskovic D., Nosek J. 1972; The ecological approach to the study of tick-borne encephalitis. Prog Med Virol 14:275–320
   [Google Scholar]
2. Bormane A., Lucenko I., Duks A., Mavtchoutko V., Ranka R., Salmina K., Baumanis V. 2004; Vectors of tick-borne diseases and epidemiological situation in Latvia in 1993-2002. Int J Med Microbiol 293 (Suppl. 37):36–47
   [Google Scholar]
3. Charrel R. N., Attoui H., Butenko A. M. & 20 other authors 2004; Tick-borne virus diseases of human interest in Europe. Clin Microbiol Infect 10:1040–1055 [CrossRef]
   [Google Scholar]
4. de Marval F. 1994; Etude séroépidémiologique de l'encéphalite à tiques et de la Borreliose de Lyme en Suisse. DSc thesis Université de Neuchâtel (in French) http://doc.rero.ch/lm.php?url=1000,40,4,20050715152513-HI/2_these_MarvalF.pdf
5. Dumpis U., Crook D., Oksi J. 1999; Tick-borne encephalitis. Clin Infect Dis 28:882–890 [CrossRef]
   [Google Scholar]
6. Felsenstein J. 1988; Phylogenies from molecular sequences: inference and reliability. Annu Rev Genet 22:521–565 [CrossRef]
   [Google Scholar]
7. Gritsun T. S., Venugopal K., Zanotto P. M. & 8 other authors 1997; Complete sequence of two tick-borne flaviviruses isolated from Siberia and the UK: analysis and significance of the 5′ and 3′-UTRs. Virus Res 49:27–39 [CrossRef]
   [Google Scholar]
8. Gritsun T. S., Nuttall P. A., Gould E. A. 2003; Tick-borne flaviviruses. Adv Virus Res 61:317–371
   [Google Scholar]
9. Gustafson R. 1994; Epidemiological studies of Lyme borreliosis and tick-borne encephalitis. Scand J Infect Dis Suppl 92:1–63
   [Google Scholar]
10. Heinz F. X., Collett M. S., Purcell R. H., Gould E. A., Howard C. R., Houghton M., Moormann R. J. M., Rice C. M., Thiel H.-J. 2000; Family Flaviviridae . In Virus Taxonomy: Seventh Report of the International Committee on Taxonomy of Viruses pp  859–878 Edited by van Regenmortel M. H. V., Fauquet C. M., Bishop D. H. L., Carstens E., Estes M. K., Lemon S. M., Maniloff J., Mayo M. A., McGeoch D., Pringle C. R., Wickner R. B. San Diego: Academic Press;
    [Google Scholar]
11. Jerzak G., Bernard K. A., Kramer L. D., Ebel G. D. 2005; Genetic variation in West Nile virus from naturally infected mosquitoes and birds suggests quasispecies structure and strong purifying selection. J Gen Virol 86:2175–2183 [CrossRef]
    [Google Scholar]
12. Khromykh A. A., Meka H., Guyatt K. J., Westaway E. G. 2001; Essential role of cyclization sequences in flavivirus RNA replication. J Virol 75:6719–6728 [CrossRef]
    [Google Scholar]
13. Korenberg E. I., Kovalevskii Y. V., Karavanov A. S., Moskvitina G. G. 1999; Mixed infection by tick-borne encephalitis virus and Borrelia in ticks. Med Vet Entomol 13:204–208 [CrossRef]
    [Google Scholar]
14. Krech T. 2002; TBE foci in Switzerland. Int J Med Microbiol 291 (Suppl. 33):30–33 [CrossRef]
    [Google Scholar]
15. Kumar S., Tamura K., Jakobsen I. B., Nei M. 2001; mega2: molecular evolutionary genetic analysis software. Bioinformatics 17:1244–1245 [CrossRef]
    [Google Scholar]
16. Kuno G., Chang G.-J. J., Tsuchiya K. R., Karabatsos N., Cropp C. B. 1998; Phylogeny of the genus Flavivirus . J Virol 72:73–83
    [Google Scholar]
17. Lole K. S., Jha J. A., Shrotri S. P., Tandon B. N., Prasad V. G. M., Arankalle V. A. 2003; Comparison of hepatitis C virus genotyping by 5′ noncoding region- and core-based reverse transcriptase PCR assay with sequencing and use of the assay for determining subtype distribution in India. J Clin Microbiol 41:5240–5244 [CrossRef]
    [Google Scholar]
18. Mandl C. W., Holzmann H., Kunz C., Heinz F. X. 1993; Complete genomic sequence of Powassan virus: evaluation of genetic elements in tick-borne versus mosquito-borne flaviviruses. Virology 194:173–184 [CrossRef]
    [Google Scholar]
19. Mandl C. W., Holzmann H., Meixner T., Rauscher S., Stadler P. F., Allison S. L., Heinz F. X. 1998; Spontaneous and engineered deletions in the 3′ noncoding region of tick-borne encephalitis virus: construction of highly attenuated mutants of a flavivirus. J Virol 72:2132–2140
    [Google Scholar]
20. Oehme R., Hartelt K., Backe H., Brockmann S., Kimmig P. 2002; Foci of tick-borne diseases in southwest Germany. Int J Med Microbiol 291 (Suppl. 33):22–29 [CrossRef]
    [Google Scholar]
21. Pretzmann G., Radda A., Loew J. 1967; Die Verteilung virustragender Zecken in Naturherden der Frühsommer-Meningoencephalitis. Zentralbl Bakteriol [Orig] 203:30–46 (in German
    [Google Scholar]
22. Randolph S. E. 2001; The shifting landscape of tick-borne zoonoses: tick-borne encephalitis and Lyme borreliosis in Europe. Philos Trans R Soc Lond B Biol Sci 356:1045–1056 [CrossRef]
    [Google Scholar]
23. Randolph S. E., Miklisova D., Lysy J., Rogers D. J., Labuda M. 1999; Incidence from coincidence: patterns of tick infestations on rodents facilitate transmission of tick-borne encephalitis virus. Parasitology 118:177–186 [CrossRef]
    [Google Scholar]
24. Schrader C., Suss J. 1999; A nested RT-PCR for the detection of tick-borne encephalitis virus (TBEV) in ticks in natural foci. Zentralbl Bakteriol 289:319–328 [CrossRef]
    [Google Scholar]